BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H09SP1|AL429972
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 1646 0.0
>3x_Contig1719
Length = 15804
Score = 1646 bits (820), Expect = 0.0
Identities = 839/856 (98%)
Strand = Plus / Minus
Query: 1 atcattaacgaataaaaaggaaaacccatcgatcaaattcgactgtaccacgaacttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9508 atcattaacgaataaaaaggaaaacccatcgatcaaattcgactgtaccacgaacttacc 9449
Query: 61 cacattccgtaaacctaaacataagaaattgaaaaaaacgtataccgagttctataagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9448 cacattccgtaaacctaaacataagaaattgaaaaaaacgtataccgagttctataagct 9389
Query: 121 attcaaatacttgaatgcagcaatccccgaaacgtttgtaccatcgctaccaaactcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9388 attcaaatacttgaatgcagcaatccccgaaacgtttgtaccatcgctaccaaactcatt 9329
Query: 181 cacgtcatatggtataaataacgaagaagatgccataaagaccgccgcaaatttccagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328 cacgtcatatggtataaataacgaagaagatgccataaagaccgccgcaaatttccagag 9269
Query: 241 ttggktcaacagaattacttcggacccattgataattcgcagcgatgaagtagcgatctt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268 ttggttcaacagaattacttcggacccattgataattcgcagcgatgaagtagcgatctt 9209
Query: 301 tatcgaatctgatttcaatacatatactcccttgaagaaagtatcatcaatctctggsct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 9208 tatcgaatctgatttcaatacatatactcccttgaagaaagtatcatcaatctctggcct 9149
Query: 361 taagaggragactttaaaacagttgagcccaccctatgacgagacattggcacttgctga 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9148 taagaggaagactttaaaacagttgagcccaccctatgacgagacattggcacttgctga 9089
Query: 421 attcaggccattggkcaaatctatctaccatacgactcaagagatcaaggsaaaactttt 480
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9088 attcaggccattggtcaaatctatctaccatacgactcaagagatcaaggcaaaactttt 9029
Query: 481 gaaaatggcaactgtgagaagacaactaagccaagaagtgaatcaattcggkcaagcgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9028 gaaaatggcaactgtgagaagacaactaagccaagaagtgaatcaattcggtcaagcgtt 8969
Query: 541 ccaaccactatccctagataactcagatttwtatcacaartttggscgtgtgawtamggc 600
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||| || |||
Sbjct: 8968 ccaaccactatccctagataactcagatttatatcacaagtttggccgtgtgattacggc 8909
Query: 601 aatmggtgacatcgagagcattgtagccaacctcgacatggccactttattcgacccact 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8908 aatcggtgacatcgagagcattgtagccaacctcgacatggccactttattcgacccact 8849
Query: 661 tkagagcatcgagcatgactcgtacatcatcaaagaagcactcacaaatcgtcatttcgt 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8848 tgagagcatcgagcatgactcgtacatcatcaaagaagcactcacaaatcgtcatttcgt 8789
Query: 721 gatgcgtgaactattacaagcgcaacagamttctagacaaagacaggrgaatgccaggra 780
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
Sbjct: 8788 gatgcgtgaactattacaagcgcaacagacttctagacaaagacaggagaatgccaggaa 8729
Query: 781 attgagagcgaaaagagatataaatcctttgaaagtgggtgaatctataagacaactgaa 840
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8728 attgagagcgaaaagagatataaatcctttgaaagtggatgaatctataagacaactgaa 8669
Query: 841 agagtctacgaaaaac 856
||||||||||||||||
Sbjct: 8668 agagtctacgaaaaac 8653
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5234
Number of Sequences: 1807
Number of extensions: 5234
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)